Pseudomonas fluorescens F113, PSF113_3036
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_3036
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3589239 - 3589994 (- strand) |
Cross-References
| RefSeq | YP_005208433.1 |
| GI | 378950945 |
| Entrez | 11831130 |
| NCBI Locus Tag | PSF113_3036 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
cobalamin biosynthetic protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.05 |
| Kyte-Doolittle Hydrophobicity Value | -0.125 |
| Molecular Weight (kDa) | 27.5 |
| Isoelectric Point (pI) | 6.41 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 447 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001085 (446 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_3036
Search term: cobalamin biosynthetic protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
sirtuin 5 [Source:HGNC Symbol;Acc:HGNC:14933]
E-value:
7.9e-38
Percent Identity:
36.9
|
References
No references are associated with this feature.