Pseudomonas fluorescens F113, PSF113_3310

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_3310
Name
Replicon	chromosome
Genomic location	3903240 - 3904277 (+ strand)

Cross-References

RefSeq	YP_005208703.1
GI	378951215
EC Number	1.1.1.1
EC Number	1.1.1.14
EC Number	1.1.1.2
Entrez	11831402
INSDC	AEV63308.1
NCBI Locus Tag	PSF113_3310
UniParc	UPI00023B47F2
UniProtKB Acc	G8Q7P8
UniProtKB ID	G8Q7P8_PSEFL
UniRef100	UniRef100_G8Q7P8
UniRef50	UniRef50_G8Q7P8
UniRef90	UniRef90_G8Q7P8

Product

Feature Type	CDS
Coding Frame	1
Product Name	Threonine dehydrogenase-related Zn-dependent dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.33
Kyte-Doolittle Hydrophobicity Value	0.199
Molecular Weight (kDa)	36.5
Isoelectric Point (pI)	6.22

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 556 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003315 (1429 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_3310 Search term: Threonine dehydrogenase-related Zn-dependent dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000296412 alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:HGNC:253] E-value: 1.4e-24 Percent Identity: 25.9

References