Pseudomonas fluorescens F113, PSF113_3404 (ditN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3404
Name
ditN
Replicon chromosome
Genomic location 4003961 - 4004863 (+ strand)

Cross-References

RefSeq YP_005208800.1
GI 378951312
EC Number 1.1.1.157
EC Number 1.1.1.35
Entrez 11831499
INSDC AEV63405.1
NCBI Locus Tag PSF113_3404
UniParc UPI00023B4B4F
UniProtKB Acc G8Q8W2
UniProtKB ID G8Q8W2_PSEFL
UniRef100 UniRef100_G8Q8W2
UniRef50 UniRef50_G8Q8W2
UniRef90 UniRef90_G8Q8W2

Product

Feature Type CDS
Coding Frame 1
Product Name
protein DitN
Synonyms
Evidence for Translation
Charge (pH 7) 1.08
Kyte-Doolittle Hydrophobicity Value 0.080
Molecular Weight (kDa) 31.8
Isoelectric Point (pI) 7.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013951 (75 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3404
Search term: ditN
Search term: protein DitN

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]
E-value: 5.0e-39
Percent Identity: 33.7

References

No references are associated with this feature.