Pseudomonas fluorescens F113, PSF113_3481

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3481
Name
Replicon chromosome
Genomic location 4092011 - 4093234 (+ strand)

Cross-References

RefSeq YP_005208878.1
GI 378951390
Entrez 11831577
INSDC AEV63483.1
NCBI Locus Tag PSF113_3481
UniParc UPI00023B3C05
UniProtKB Acc G8Q9U6
UniProtKB ID G8Q9U6_PSEFL
UniRef100 UniRef100_G8Q9U6
UniRef50 UniRef50_G8Q9U6
UniRef90 UniRef90_G8Q9U6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.77
Kyte-Doolittle Hydrophobicity Value 0.158
Molecular Weight (kDa) 44466.1
Isoelectric Point (pI) 7.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 480 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015744 (18 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3481

Human Homologs

References

No references are associated with this feature.