Pseudomonas fluorescens F113, PSF113_3886

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_3886
Name
Replicon	chromosome
Genomic location	4581961 - 4583910 (+ strand)

Cross-References

RefSeq	YP_005209282.1
GI	378951794
EC Number	6.3.4.14
EC Number	6.4.1.2
EC Number	6.4.1.4
Entrez	11831981
INSDC	AEV63887.1
NCBI Locus Tag	PSF113_3886
UniParc	UPI00023B4938
UniProtKB Acc	G8PXS8
UniProtKB ID	G8PXS8_PSEFL
UniRef100	UniRef100_G8PXS8
UniRef50	UniRef50_Q9I299
UniRef90	UniRef90_G8PXS8

Product

Feature Type	CDS
Coding Frame	1
Product Name	methylcrotonyl-CoA carboxylase biotin-containing subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-15.81
Kyte-Doolittle Hydrophobicity Value	-0.077
Molecular Weight (kDa)	69749.7
Isoelectric Point (pI)	5.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 641 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003427 (523 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_3886 Search term: methylcrotonyl-CoA carboxylase biotin-containing subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000265594 methylcrotonyl-CoA carboxylase subunit 1 [Source:HGNC Symbol;Acc:HGNC:6936] E-value: 3.8e-161 Percent Identity: 45.7

References