Pseudomonas fluorescens F113, PSF113_3977

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_3977
Name
Replicon chromosome
Genomic location 4678718 - 4681411 (+ strand)

Cross-References

RefSeq YP_005209369.1
GI 378951881
EC Number 3.4.21.-
Entrez 11832073
INSDC AEV63974.1
NCBI Locus Tag PSF113_3977
UniParc UPI00023B4B84
UniProtKB Acc G8PYX7
UniProtKB ID G8PYX7_PSEFL
UniRef100 UniRef100_G8PYX7
UniRef50 UniRef50_B1J601
UniRef90 UniRef90_G8PYX7

Product

Feature Type CDS
Coding Frame 1
Product Name
SNF2-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.41
Kyte-Doolittle Hydrophobicity Value -0.352
Molecular Weight (kDa) 101909.1
Isoelectric Point (pI) 7.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 394 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000772 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_3977
Search term: SNF2-like protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
E-value: 7.6e-75
Percent Identity: 39.1

References

No references are associated with this feature.