Pseudomonas fluorescens F113, PSF113_3988 (faoA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_3988
|
| Name |
faoA
|
| Replicon | chromosome |
| Genomic location | 4693594 - 4695741 (- strand) |
Cross-References
| RefSeq | YP_005209380.1 |
| GI | 378951892 |
| EC Number | 1.1.1.35 |
| EC Number | 4.2.1.17 |
| EC Number | 5.1.2.3 |
| EC Number | 5.3.3.8 |
| Entrez | 11832084 |
| NCBI Locus Tag | PSF113_3988 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein FaoA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.15 |
| Kyte-Doolittle Hydrophobicity Value | -0.022 |
| Molecular Weight (kDa) | 77481.9 |
| Isoelectric Point (pI) | 5.84 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 1WDL | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form II (native4) | Pseudomonas fragi | 3.5 | X-RAY DIFFRACTION | 92.9 |
| 1WDM | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native3) | Pseudomonas fragi | 3.8 | X-RAY DIFFRACTION | 92.9 |
| 2D3T | LYASE, OXIDOREDUCTASE/TRANSFERASE | 10/01/05 | Fatty Acid beta-oxidation multienzyme complex from Pseudomonas Fragi, Form V | Pseudomonas fragi | 3.4 | X-RAY DIFFRACTION | 92.9 |
| 1WDK | LYASE,OXIDOREDUCTASE/TRANSFERASE | 05/17/04 | fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2) | Pseudomonas fragi | 2.5 | X-RAY DIFFRACTION | 92.9 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 485 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002568 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_3988
Search term: faoA
Search term: protein FaoA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:HGNC Symbol;Acc:HGNC:4801]
E-value:
2.3e-98
Percent Identity:
33.1
|
References
No references are associated with this feature.