Pseudomonas fluorescens F113, PSF113_4050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_4050
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4774633 - 4775385 (+ strand) |
Cross-References
| RefSeq | YP_005209442.1 |
| GI | 378951954 |
| EC Number | 3.6.1.3 |
| Entrez | 11832146 |
| NCBI Locus Tag | PSF113_4050 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter in pyoverdin gene cluster, ATP-binding component
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.41 |
| Kyte-Doolittle Hydrophobicity Value | -0.083 |
| Molecular Weight (kDa) | 27294.3 |
| Isoelectric Point (pI) | 7.78 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003124 (478 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_4050
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value:
6.9e-10
Percent Identity:
27.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value:
6.9e-10
Percent Identity:
27.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily G member 2 (Junior blood group) [Source:HGNC Symbol;Acc:HGNC:74]
E-value:
6.9e-10
Percent Identity:
27.4
|
References
No references are associated with this feature.