Pseudomonas fluorescens F113, PSF113_4066

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4066
Name
Replicon chromosome
Genomic location 4793643 - 4794566 (- strand)

Cross-References

RefSeq YP_005209458.1
GI 378951970
Entrez 11832162
INSDC AEV64063.1
NCBI Locus Tag PSF113_4066
UniParc UPI00023B3D35
UniProtKB Acc G8Q037
UniProtKB ID G8Q037_PSEFL
UniRef100 UniRef100_G8Q037
UniRef50 UniRef50_Q4KFL3
UniRef90 UniRef90_F2KJY7

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.38
Kyte-Doolittle Hydrophobicity Value 0.005
Molecular Weight (kDa) 33250.7
Isoelectric Point (pI) 9.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 457 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000179 (440 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4066

Human Homologs

References

No references are associated with this feature.