Pseudomonas fluorescens F113, PSF113_4478 (rsmA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4478
Name
rsmA
Replicon chromosome
Genomic location 5232210 - 5232398 (- strand)

Cross-References

RefSeq YP_005209863.1
GI 378952375
Entrez 11832581
INSDC AEV64468.1
NCBI Locus Tag PSF113_4478
UniParc UPI000204197A
UniProtKB Acc G8Q6P1
UniProtKB ID G8Q6P1_PSEFL
UniRef100 UniRef100_A0A075PC07
UniRef50 UniRef50_P69921
UniRef90 UniRef90_P69921

Product

Feature Type CDS
Coding Frame 1
Product Name
protein RsmA
Synonyms
Evidence for Translation
Charge (pH 7) 0.44
Kyte-Doolittle Hydrophobicity Value -0.232
Molecular Weight (kDa) 6.9
Isoelectric Point (pI) 7.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 219 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000872 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4478
Search term: rsmA
Search term: protein RsmA

Human Homologs

References

No references are associated with this feature.