Pseudomonas fluorescens F113, PSF113_4507 (romA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_4507
|
| Name |
romA
|
| Replicon | chromosome |
| Genomic location | 5263908 - 5264966 (- strand) |
Cross-References
| RefSeq | YP_005209892.1 |
| GI | 378952404 |
| Entrez | 11832610 |
| NCBI Locus Tag | PSF113_4507 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein RomA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.91 |
| Kyte-Doolittle Hydrophobicity Value | -0.323 |
| Molecular Weight (kDa) | 40007.0 |
| Isoelectric Point (pI) | 6.88 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 263 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001710 (456 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_4507
Search term: romA
Search term: protein RomA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value:
9.9e-55
Percent Identity:
38.8
|
References
No references are associated with this feature.