Pseudomonas fluorescens F113, PSF113_4552 (apbC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens F113
GCF_000237065.1|latest |
| Locus Tag |
PSF113_4552
|
| Name |
apbC
|
| Replicon | chromosome |
| Genomic location | 5306735 - 5307829 (- strand) |
Cross-References
| RefSeq | YP_005209937.1 |
| GI | 378952449 |
| Entrez | 11832655 |
| INSDC | AEV64542.1 |
| NCBI Locus Tag | PSF113_4552 |
| UniParc | UPI00023B4B97 |
| UniProtKB Acc | G8Q6W5 |
| UniProtKB ID | G8Q6W5_PSEFL |
| UniRef100 | UniRef100_G8Q6W5 |
| UniRef50 | UniRef50_A4G4Z1 |
| UniRef90 | UniRef90_G8Q6W5 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein ApbC
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.64 |
| Kyte-Doolittle Hydrophobicity Value | 0.199 |
| Molecular Weight (kDa) | 38.4 |
| Isoelectric Point (pI) | 4.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002161 (551 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSF113_4552
Search term: apbC
Search term: protein ApbC
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
E-value:
5.5e-69
Percent Identity:
50.4
|
References
No references are associated with this feature.