Pseudomonas fluorescens F113, PSF113_4770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4770
Name
Replicon chromosome
Genomic location 5552301 - 5553269 (+ strand)

Cross-References

RefSeq YP_005210154.1
GI 378952666
Entrez 11832873
INSDC AEV64759.1
NCBI Locus Tag PSF113_4770
UniParc UPI00023B40A4
UniProtKB Acc G8QA27
UniProtKB ID G8QA27_PSEFL
UniRef100 UniRef100_G8QA27
UniRef50 UniRef50_Q13P85
UniRef90 UniRef90_C3KDQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
putative transcriptional regulator LYSR-type
Synonyms
Evidence for Translation
Charge (pH 7) -2.47
Kyte-Doolittle Hydrophobicity Value -0.003
Molecular Weight (kDa) 34970.5
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 478 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000157 (872 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4770

Human Homologs

References

No references are associated with this feature.