Pseudomonas fluorescens F113, PSF113_4895 (degS)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_4895
Name	degS
Replicon	chromosome
Genomic location	5688094 - 5689254 (+ strand)

Cross-References

RefSeq	YP_005210279.1
GI	378952791
EC Number	1.3.1.74
EC Number	3.4.21.-
Entrez	11832999
INSDC	AEV64884.1
NCBI Locus Tag	PSF113_4895
UniParc	UPI00023B44FE
UniProtKB Acc	G8QBT6
UniProtKB ID	G8QBT6_PSEFL
UniRef100	UniRef100_G8QBT6
UniRef50	UniRef50_G8QBT6
UniRef90	UniRef90_G8QBT6

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein DegS
Synonyms
Evidence for Translation
Charge (pH 7)	0.73
Kyte-Doolittle Hydrophobicity Value	-0.001
Molecular Weight (kDa)	41.0
Isoelectric Point (pI)	7.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004035 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_4895 Search term: degS Search term: protein DegS

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000498033 HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476] E-value: 9.6e-35 Percent Identity: 34.3
Ensembl 110, assembly GRCh38.p14	ENSP00000357980 HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476] E-value: 9.6e-35 Percent Identity: 34.3

References