Pseudomonas fluorescens F113, PSF113_5381

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_5381
Name
Replicon	chromosome
Genomic location	6221485 - 6223167 (+ strand)

Cross-References

RefSeq	YP_005210747.1
GI	378953259
EC Number	1.13.12.3
EC Number	1.4.3.21
Entrez	11833496
INSDC	AEV65352.1
NCBI Locus Tag	PSF113_5381
UniParc	UPI0001AE7F32
UniProtKB Acc	G8Q1B3
UniProtKB ID	G8Q1B3_PSEFL
UniRef100	UniRef100_C7DRH2
UniRef50	UniRef50_B3IVI6
UniRef90	UniRef90_D7I5Z1

Product

Feature Type	CDS
Coding Frame	1
Product Name	Lysine 2-monooxygenase
Synonyms
Evidence for Translation
Charge (pH 7)	-12.56
Kyte-Doolittle Hydrophobicity Value	-0.242
Molecular Weight (kDa)	62330.4
Isoelectric Point (pI)	5.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3WE0	OXIDOREDUCTASE	06/26/13	L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813	Pseudomonas sp.	1.9	X-RAY DIFFRACTION	91.4
5YB7	OXIDOREDUCTASE	09/03/17	L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-ornithine complex	Pseudomonas sp. AIU 813	2	X-RAY DIFFRACTION	91.4
5YB6	OXIDOREDUCTASE	09/03/17	L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-lysine complex	Pseudomonas sp. AIU 813	2.1	X-RAY DIFFRACTION	91.4
5YB8	OXIDOREDUCTASE	09/03/17	L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-arginine complex	Pseudomonas sp. AIU 813	2.3	X-RAY DIFFRACTION	91.4

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015101 (190 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_5381 Search term: Lysine 2-monooxygenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000375702 interleukin 4 induced 1 [Source:HGNC Symbol;Acc:HGNC:19094] E-value: 2.0e-17 Percent Identity: 24.3
Ensembl 110, assembly GRCh38.p14	ENSP00000472474 interleukin 4 induced 1 [Source:HGNC Symbol;Acc:HGNC:19094] E-value: 2.0e-17 Percent Identity: 24.3
Ensembl 110, assembly GRCh38.p14	ENSP00000342557 interleukin 4 induced 1 [Source:HGNC Symbol;Acc:HGNC:19094] E-value: 2.0e-17 Percent Identity: 24.3

References