Pseudomonas fluorescens F113, PSF113_5398 (bioF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5398
Name
bioF
Replicon chromosome
Genomic location 6242678 - 6243856 (- strand)

Cross-References

RefSeq YP_005210765.1
GI 378953277
EC Number 1.11.1.7
EC Number 2.3.1.47
Entrez 11833517
INSDC AEV65370.1
NCBI Locus Tag PSF113_5398
UniParc UPI00023B41BE
UniProtKB Acc G8Q1D1
UniProtKB ID G8Q1D1_PSEFL
UniRef100 UniRef100_G8Q1D1
UniRef50 UniRef50_B3PI88
UniRef90 UniRef90_Q4K4T3

Product

Feature Type CDS
Coding Frame 1
Product Name
protein BioF
Synonyms
Evidence for Translation
Charge (pH 7) -5.20
Kyte-Doolittle Hydrophobicity Value 0.051
Molecular Weight (kDa) 41.9
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000488 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5398
Search term: bioF
Search term: protein BioF

Human Homologs

Ensembl 97, assembly GRCh38.p12
glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
E-value: 1.7e-59
Percent Identity: 36.7

References

No references are associated with this feature.