Pseudomonas fluorescens F113, PSF113_5449

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5449
Name
Replicon chromosome
Genomic location 6307793 - 6308770 (- strand)

Cross-References

RefSeq YP_005210816.1
GI 378953328
EC Number 2.1.2.-
EC Number 3.4.13.-
EC Number 3.5.1.10
Entrez 11833568
INSDC AEV65421.1
NCBI Locus Tag PSF113_5449
UniParc UPI00023B42E6
UniProtKB Acc G8Q2F1
UniProtKB ID G8Q2F1_PSEFL
UniRef100 UniRef100_G8Q2F1
UniRef50 UniRef50_I1EZS2
UniRef90 UniRef90_G8Q2F1

Product

Feature Type CDS
Coding Frame 1
Product Name
Microsomal dipeptidase
Synonyms
Evidence for Translation
Charge (pH 7) -8.01
Kyte-Doolittle Hydrophobicity Value -0.185
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 5.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2I5G HYDROLASE 08/24/06 Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 92.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 276 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004953 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5449

Human Homologs

Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 1.0e-21
Percent Identity: 24.7
Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 1.0e-21
Percent Identity: 24.7

References

No references are associated with this feature.