Pseudomonas fluorescens F113, PSF113_5623 (spuD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5623
Name
spuD
Replicon chromosome
Genomic location 6490483 - 6491595 (- strand)

Cross-References

RefSeq YP_005210990.1
GI 378953502
Entrez 11833742
INSDC AEV65595.1
NCBI Locus Tag PSF113_5623
UniParc UPI00023B486D
UniProtKB Acc G8Q4R2
UniProtKB ID G8Q4R2_PSEFL
UniRef100 UniRef100_G8Q4R2
UniRef50 UniRef50_Q9I6J0
UniRef90 UniRef90_Q4K449

Product

Feature Type CDS
Coding Frame 1
Product Name
protein SpuD/PotF1
Synonyms
Evidence for Translation
Charge (pH 7) 0.90
Kyte-Doolittle Hydrophobicity Value -0.125
Molecular Weight (kDa) 40005.5
Isoelectric Point (pI) 7.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 303 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000297 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5623
Search term: spuD

Human Homologs

References

No references are associated with this feature.