Pseudomonas fluorescens F113, PSF113_5820 (vasD2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5820
Name
vasD2
Replicon chromosome
Genomic location 6714477 - 6714980 (- strand)

Cross-References

RefSeq YP_005211189.1
GI 378953701
Entrez 11833942
INSDC AEV65794.1
NCBI Locus Tag PSF113_5820
UniParc UPI00023B3C86
UniProtKB Acc G8Q738
UniProtKB ID G8Q738_PSEFL
UniRef100 UniRef100_G8Q738
UniRef50 UniRef50_Q9I359
UniRef90 UniRef90_G8Q738

Product

Feature Type CDS
Coding Frame 1
Product Name
protein VasD
Synonyms
Evidence for Translation
Charge (pH 7) -4.11
Kyte-Doolittle Hydrophobicity Value -0.143
Molecular Weight (kDa) 18.6
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 70 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000079 (812 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5820
Search term: vasD2
Search term: protein VasD

Human Homologs

References

No references are associated with this feature.