Pseudomonas fluorescens SBW25, PFLU0021

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0021
Name
Replicon chromosome
Genomic location 23630 - 24187 (+ strand)

Cross-References

RefSeq YP_002869718.1
GI 229587599
Entrez 7820001
INSDC CAY46306.1
UniParc UPI00019D9B26
UniProtKB Acc C3K4H8
UniProtKB ID C3K4H8_PSEFS
UniRef100 UniRef100_C3K4H8
UniRef50 UniRef50_Q88B46
UniRef90 UniRef90_E2XJ61

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.35
Kyte-Doolittle Hydrophobicity Value -0.131
Molecular Weight (kDa) 20.7
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 636 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000022 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0021

Human Homologs

Ensembl 110, assembly GRCh38.p14
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value: 3.0e-10
Percent Identity: 28.6

References

No references are associated with this feature.