Pseudomonas fluorescens SBW25, PFLU0023 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0023
Name
hemF
Replicon chromosome
Genomic location 25472 - 26404 (+ strand)

Cross-References

RefSeq YP_002869720.1
GI 229587601
EC Number 1.3.3.3
Entrez 7819077
INSDC CAY46308.1
UniParc UPI00019D9B28
UniProtKB Acc C3K4I0
UniProtKB ID HEM6_PSEFS
UniRef100 UniRef100_C3K4I0
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q4KKQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -7.74
Kyte-Doolittle Hydrophobicity Value -0.427
Molecular Weight (kDa) 35.3
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0023
Search term: hemF

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 8.0e-73
Percent Identity: 43.8

References

No references are associated with this feature.