Pseudomonas fluorescens SBW25, PFLU1276 (dxr)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1276
Name
dxr
Replicon chromosome
Genomic location 1411027 - 1412217 (+ strand)

Cross-References

RefSeq YP_002870928.1
GI 229588809
EC Number 1.1.1.267
Entrez 7816720
INSDC CAY47533.1
UniParc UPI00019DA365
UniProtKB Acc C3K601
UniProtKB ID DXR_PSEFS
UniRef100 UniRef100_C3K601
UniRef50 UniRef50_A8GIE2
UniRef90 UniRef90_C3K601

Product

Feature Type CDS
Coding Frame 1
Product Name
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Synonyms
Evidence for Translation
Charge (pH 7) -7.72
Kyte-Doolittle Hydrophobicity Value 0.199
Molecular Weight (kDa) 42367.3
Isoelectric Point (pI) 5.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 507 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002024 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1276
Search term: dxr

Human Homologs

References

No references are associated with this feature.