Pseudomonas fluorescens SBW25, PFLU1375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1375
Name
Replicon chromosome
Genomic location 1516326 - 1517576 (- strand)

Cross-References

RefSeq YP_002871024.1
GI 229588905
Entrez 7817937
INSDC CAY47629.1
UniParc UPI00019D9C4C
UniProtKB Acc C3KBM9
UniProtKB ID C3KBM9_PSEFS
UniRef100 UniRef100_C3KBM9
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_C3KBM9

Product

Feature Type CDS
Coding Frame 1
Product Name
putative porin -like membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.20
Kyte-Doolittle Hydrophobicity Value -0.439
Molecular Weight (kDa) 45850.8
Isoelectric Point (pI) 8.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 17 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021838 (39 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1375

Human Homologs

References

No references are associated with this feature.