Pseudomonas fluorescens SBW25, PFLU1518

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1518
Name
Replicon chromosome
Genomic location 1663983 - 1664915 (+ strand)

Cross-References

RefSeq YP_002871160.1
GI 229589041
Entrez 7817060
INSDC CAY47767.1
UniParc UPI00019D9E19
UniProtKB Acc C3K5F3
UniProtKB ID C3K5F3_PSEFS
UniRef100 UniRef100_C3K5F3
UniRef50 UniRef50_D7HXF1
UniRef90 UniRef90_C3K5F3

Product

Feature Type CDS
Coding Frame 1
Product Name
putative dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -9.13
Kyte-Doolittle Hydrophobicity Value 0.034
Molecular Weight (kDa) 34.1
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 619 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001240 (513 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1518

Human Homologs

Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7
Ensembl 110, assembly GRCh38.p14
C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]
E-value: 2.0e-06
Percent Identity: 27.7

References

No references are associated with this feature.