Pseudomonas fluorescens SBW25, PFLU2380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU2380
Name
Replicon chromosome
Genomic location 2592334 - 2593335 (- strand)

Cross-References

RefSeq YP_002871984.1
GI 229589865
Entrez 7817813
INSDC CAY48613.1
UniParc UPI00019DA221
UniProtKB Acc C3K977
UniProtKB ID C3K977_PSEFS
UniRef100 UniRef100_C3K977
UniRef50 UniRef50_G8LG48
UniRef90 UniRef90_C3K977

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.77
Kyte-Doolittle Hydrophobicity Value 0.171
Molecular Weight (kDa) 35573.5
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 293 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016002 (84 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU2380

Human Homologs

References

No references are associated with this feature.