Pseudomonas fluorescens SBW25, PFLU3195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU3195
Name
Replicon chromosome
Genomic location 3499027 - 3500472 (- strand)

Cross-References

RefSeq YP_002872767.1
GI 229590648
Entrez 7819654
INSDC CAY49421.1
UniParc UPI00019DA57E
UniProtKB Acc C3KC25
UniProtKB ID C3KC25_PSEFS
UniRef100 UniRef100_C3KC25
UniRef50 UniRef50_E5AM77
UniRef90 UniRef90_C3KC25

Product

Feature Type CDS
Coding Frame 1
Product Name
putative FAD-binding oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -14.85
Kyte-Doolittle Hydrophobicity Value 0.024
Molecular Weight (kDa) 51579.1
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 550 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002556 (343 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU3195

Human Homologs

Ensembl 110, assembly GRCh38.p14
lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
E-value: 6.0e-119
Percent Identity: 48.1

References

No references are associated with this feature.