Pseudomonas fluorescens SBW25, PFLU3730

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU3730
Name
Replicon	chromosome
Genomic location	4128202 - 4129002 (+ strand)

Cross-References

RefSeq	YP_002873285.1
GI	229591166
Entrez	7822371
INSDC	CAY50003.1
UniParc	UPI00019DA51E
UniProtKB Acc	C3JXV5
UniProtKB ID	C3JXV5_PSEFS
UniRef100	UniRef100_C3JXV5
UniRef50	UniRef50_E0SJ31
UniRef90	UniRef90_Q883G7

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative short-chain dehydrogenase/reductase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.13
Kyte-Doolittle Hydrophobicity Value	-0.149
Molecular Weight (kDa)	29.0
Isoelectric Point (pI)	5.40

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG022458 (12 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU3730 Search term: putative short-chain dehydrogenase/reductase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000518355 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 3.6e-25 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000326219 dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985] E-value: 3.6e-25 Percent Identity: 30.6

References