Pseudomonas fluorescens SBW25, PFLU4109

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4109
Name
Replicon chromosome
Genomic location 4546208 - 4547029 (+ strand)

Cross-References

RefSeq YP_002873659.1
GI 229591540
Entrez 7816968
INSDC CAY50575.1
UniParc UPI00019DAB06
UniProtKB Acc C3JZJ7
UniProtKB ID C3JZJ7_PSEFS
UniRef100 UniRef100_C3JZJ7
UniRef50 UniRef50_C3JZJ7
UniRef90 UniRef90_C3JZJ7

Product

Feature Type CDS
Coding Frame 1
Product Name
IclR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.88
Kyte-Doolittle Hydrophobicity Value -0.330
Molecular Weight (kDa) 30.7
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 233 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002441 (346 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4109

Human Homologs

References

No references are associated with this feature.