Pseudomonas fluorescens SBW25, PFLU4874

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4874
Name
Replicon chromosome
Genomic location 5354287 - 5355498 (- strand)

Cross-References

RefSeq YP_002874381.1
GI 229592262
EC Number 4.2.1.70
Entrez 7820833
INSDC CAY51757.1
UniParc UPI00019DA4C9
UniProtKB Acc C3JYN9
UniProtKB ID C3JYN9_PSEFS
UniRef100 UniRef100_C3JYN9
UniRef50 UniRef50_Q9HZ55
UniRef90 UniRef90_C3JYN9

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal large subunit pseudouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) 19.93
Kyte-Doolittle Hydrophobicity Value -0.887
Molecular Weight (kDa) 45.0
Isoelectric Point (pI) 10.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002437 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4874

Human Homologs

References

No references are associated with this feature.