Pseudomonas fluorescens SBW25, PFLU4994

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4994
Name
Replicon chromosome
Genomic location 5484459 - 5486249 (+ strand)

Cross-References

RefSeq YP_002874500.1
GI 229592381
EC Number 6.1.1.15
Entrez 7819415
INSDC CAY51951.1
UniParc UPI00019DA671
UniProtKB Acc C3K1A7
UniProtKB ID C3K1A7_PSEFS
UniRef100 UniRef100_C3K1A7
UniRef50 UniRef50_P43830
UniRef90 UniRef90_Q3KH16

Product

Feature Type CDS
Coding Frame 1
Product Name
prolyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -11.43
Kyte-Doolittle Hydrophobicity Value -0.288
Molecular Weight (kDa) 66110.9
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000922 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4994

Human Homologs

Ensembl 110, assembly GRCh38.p14
prolyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:30563]
E-value: 5.6e-66
Percent Identity: 31.5

References

No references are associated with this feature.