Pseudomonas fluorescens SBW25, PFLU5000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5000
Name
Replicon chromosome
Genomic location 5495309 - 5495851 (- strand)

Cross-References

RefSeq YP_002874506.1
GI 229592387
Entrez 7819421
INSDC CAY51963.1
UniParc UPI00019DA6E9
UniProtKB Acc C3K1B3
UniProtKB ID C3K1B3_PSEFS
UniRef100 UniRef100_A0A0D0TQN2
UniRef50 UniRef50_C1DSZ1
UniRef90 UniRef90_I7BB50

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.07
Kyte-Doolittle Hydrophobicity Value -0.399
Molecular Weight (kDa) 20.7
Isoelectric Point (pI) 4.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2OT9 STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02/07/07 Crystal structure of YaeQ protein from Pseudomonas syringae Pseudomonas syringae pv. tomato 1.97 X-RAY DIFFRACTION 93.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001957 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5000

Human Homologs

References

No references are associated with this feature.