Pseudomonas fluorescens SBW25, PFLU5016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5016
Name
Replicon chromosome
Genomic location 5510408 - 5511718 (+ strand)

Cross-References

RefSeq YP_002874521.1
GI 229592402
Entrez 7819435
INSDC CAY51987.1
UniParc UPI00019DA6F7
UniProtKB Acc C3K1H5
UniProtKB ID C3K1H5_PSEFS
UniRef100 UniRef100_C3K1H5
UniRef50 UniRef50_Q02RM2
UniRef90 UniRef90_E2XXL0

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane transport protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.79
Kyte-Doolittle Hydrophobicity Value 0.784
Molecular Weight (kDa) 46044.7
Isoelectric Point (pI) 8.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001933 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5016

Human Homologs

References

No references are associated with this feature.