Pseudomonas fluorescens SBW25, PFLU5048 (xseA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5048
Name
xseA
Replicon chromosome
Genomic location 5546553 - 5547932 (+ strand)

Cross-References

RefSeq YP_002874551.1
GI 229592432
EC Number 3.1.11.6
Entrez 7819466
INSDC CAY52033.1
UniParc UPI00019DA807
UniProtKB Acc C3K1K5
UniProtKB ID EX7L_PSEFS
UniRef100 UniRef100_C3K1K5
UniRef50 UniRef50_Q886X9
UniRef90 UniRef90_Q4K6V9

Product

Feature Type CDS
Coding Frame 1
Product Name
exodeoxyribonuclease VII large subunit
Synonyms
Evidence for Translation
Charge (pH 7) 20.58
Kyte-Doolittle Hydrophobicity Value -0.214
Molecular Weight (kDa) 51133.4
Isoelectric Point (pI) 11.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001887 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5048
Search term: xseA

Human Homologs

References

No references are associated with this feature.