Pseudomonas fluorescens SBW25, PFLU5266 (carA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5266
Name
carA
Replicon chromosome
Genomic location 5781412 - 5782548 (- strand)

Cross-References

RefSeq YP_002874768.1
GI 229592649
EC Number 6.3.5.5
Entrez 7821138
INSDC CAY52370.1
UniParc UPI00019DAF3F
UniProtKB Acc C3K272
UniProtKB ID C3K272_PSEFS
UniRef100 UniRef100_C3K272
UniRef50 UniRef50_P0A6F2
UniRef90 UniRef90_Q87WP3

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase small subunit
Synonyms
Evidence for Translation
Charge (pH 7) -10.71
Kyte-Doolittle Hydrophobicity Value -0.096
Molecular Weight (kDa) 40799.0
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 630 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004402 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5266
Search term: carA

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 3.3e-64
Percent Identity: 39.7
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 3.3e-64
Percent Identity: 39.7

References

No references are associated with this feature.