Pseudomonas fluorescens SBW25, PFLU5276 (smpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5276
Name
smpB
Replicon chromosome
Genomic location 5791663 - 5792145 (+ strand)

Cross-References

RefSeq YP_002874778.1
GI 229592659
Entrez 7821140
INSDC CAY52382.1
UniParc UPI00019DAF49
UniProtKB Acc C3K282
UniProtKB ID SSRP_PSEFS
UniRef100 UniRef100_C3K282
UniRef50 UniRef50_A4XYG4
UniRef90 UniRef90_Q4KIH9

Product

Feature Type CDS
Coding Frame 1
Product Name
SsrA-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 12.58
Kyte-Doolittle Hydrophobicity Value -0.636
Molecular Weight (kDa) 18.3
Isoelectric Point (pI) 10.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004412 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5276
Search term: smpB

Human Homologs

References

No references are associated with this feature.