Pseudomonas fluorescens SBW25, PFLU5299

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5299
Name
Replicon chromosome
Genomic location 5815075 - 5816229 (- strand)

Cross-References

RefSeq YP_002874798.1
GI 229592679
Entrez 7821161
INSDC CAY52416.1
UniParc UPI00019DAF80
UniProtKB Acc C3K2A2
UniProtKB ID C3K2A2_PSEFS
UniRef100 UniRef100_C3K2A2
UniRef50 UniRef50_Q4K9I4
UniRef90 UniRef90_C3K2A2

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.92
Kyte-Doolittle Hydrophobicity Value -0.073
Molecular Weight (kDa) 42454.2
Isoelectric Point (pI) 7.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 228 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000800 (1482 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5299

Human Homologs

References

No references are associated with this feature.