Pseudomonas fluorescens SBW25, PFLU5446 (dedA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5446
Name
dedA
Replicon chromosome
Genomic location 5980156 - 5980821 (+ strand)

Cross-References

RefSeq YP_002874944.1
GI 229592825
Entrez 7817730
INSDC CAY52640.1
UniParc UPI00019DAD5E
UniProtKB Acc C3K2P8
UniProtKB ID C3K2P8_PSEFS
UniRef100 UniRef100_C3K2P8
UniRef50 UniRef50_P0ABP7
UniRef90 UniRef90_Q3K673

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane-like protein DedA
Synonyms
Evidence for Translation
Charge (pH 7) 5.67
Kyte-Doolittle Hydrophobicity Value 0.697
Molecular Weight (kDa) 24373.8
Isoelectric Point (pI) 9.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 425 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001655 (502 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5446
Search term: dedA

Human Homologs

References

No references are associated with this feature.