Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
Locus Tag |
PFLU5532
|
Name |
rpsL
|
Replicon | chromosome |
Genomic location | 6053028 - 6053399 (- strand) |
RefSeq | YP_002875027.1 |
GI | 229592908 |
Entrez | 7822113 |
INSDC | CAY52775.1 |
UniParc | UPI00000084E2 |
UniProtKB Acc | C3K2Y1 |
UniProtKB ID | RS12_PSEFS |
UniRef100 | UniRef100_Q48D31 |
UniRef50 | UniRef50_P61941 |
UniRef90 | UniRef90_A6W397 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
30S ribosomal protein S12
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 19.61 |
Kyte-Doolittle Hydrophobicity Value | -0.780 |
Molecular Weight (kDa) | 13.7 |
Isoelectric Point (pI) | 11.59 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPC | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.95 | ELECTRON MICROSCOPY | 94.2 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 94.2 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 94.3 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 94.2 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 94.3 |
6SPE | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.6 | ELECTRON MICROSCOPY | 94.2 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 94.3 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 94.3 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 661 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001443 (531 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5532
Search term: rpsL
Search term: 30S ribosomal protein S12
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10380]
E-value:
9.5e-21
Percent Identity:
50.5
|