Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
Locus Tag |
PFLU5534
|
Name |
rpoB
|
Replicon | chromosome |
Genomic location | 6057880 - 6061953 (- strand) |
RefSeq | YP_002875029.1 |
GI | 229592910 |
EC Number | 2.7.7.6 |
Entrez | 7820377 |
INSDC | CAY52777.1 |
UniParc | UPI00019DADDF |
UniProtKB Acc | C3K2Y3 |
UniProtKB ID | RPOB_PSEFS |
UniRef100 | UniRef100_C3K2Y3 |
UniRef50 | UniRef50_P06173 |
UniRef90 | UniRef90_Q51561 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
DNA-directed RNA polymerase subunit beta
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -18.66 |
Kyte-Doolittle Hydrophobicity Value | -0.286 |
Molecular Weight (kDa) | 151.0 |
Isoelectric Point (pI) | 5.70 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7XYB | TRANSCRIPTION | 06/01/22 | The cryo-EM structure of an AlpA-loaded complex | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3.7 | ELECTRON MICROSCOPY | 91.4 |
7XL4 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe) | Pseudomonas aeruginosa PAO1 | 3.86 | ELECTRON MICROSCOPY | 91.4 |
7XL3 | TRANSCRIPTION | 04/21/22 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe) | Pseudomonas aeruginosa PAO1 | 3.13 | ELECTRON MICROSCOPY | 91.4 |
7VF9 | TRANSCRIPTION | 09/10/21 | Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes | Pseudomonas aeruginosa PAO1 | 4.04 | ELECTRON MICROSCOPY | 91.4 |
7F0R | TRANSCRIPTION/DNA | 06/06/21 | Cryo-EM structure of Pseudomonas aeruginosa SutA transcription activation complex | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT | 5.8 | ELECTRON MICROSCOPY | 91.4 |
7XYA | TRANSCRIPTION | 06/01/22 | The cryo-EM structure of an AlpA-loading complex | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3.3 | ELECTRON MICROSCOPY | 91.4 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001441 (533 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5534
Search term: rpoB
Search term: DNA-directed RNA polymerase subunit beta
|