Pseudomonas fluorescens SBW25, PFLU5824 (rpiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5824
Name
rpiA
Replicon chromosome
Genomic location 6379523 - 6380194 (+ strand)

Cross-References

RefSeq YP_002875313.1
GI 229593194
EC Number 5.3.1.6
Entrez 7816481
INSDC CAY53246.1
UniParc UPI00019DAF26
UniProtKB Acc C3K3R7
UniProtKB ID RPIA_PSEFS
UniRef100 UniRef100_C3K3R7
UniRef50 UniRef50_Q13ZQ5
UniRef90 UniRef90_Q4K469

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose-5-phosphate isomerase A
Synonyms
Evidence for Translation
Charge (pH 7) -8.10
Kyte-Doolittle Hydrophobicity Value 0.290
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000322 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5824
Search term: rpiA

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribose 5-phosphate isomerase A [Source:HGNC Symbol;Acc:HGNC:10297]
E-value: 7.3e-19
Percent Identity: 35.2

References

No references are associated with this feature.