Pseudomonas fluorescens SBW25, PFLU5892

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU5892
Name
Replicon	chromosome
Genomic location	6445747 - 6446724 (+ strand)

Cross-References

RefSeq	YP_002875378.1
GI	229593259
Entrez	7817440
INSDC	CAY53355.1
UniParc	UPI00019DAFA9
UniProtKB Acc	C3K3Y2
UniProtKB ID	C3K3Y2_PSEFS
UniRef100	UniRef100_C3K3Y2
UniRef50	UniRef50_A4YJY4
UniRef90	UniRef90_K9NS39

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative sinc-binding oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.31
Kyte-Doolittle Hydrophobicity Value	0.157
Molecular Weight (kDa)	34203.1
Isoelectric Point (pI)	6.29

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 573 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004815 (517 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU5892 Search term: putative sinc-binding oxidoreductase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000339399 crystallin zeta [Source:HGNC Symbol;Acc:HGNC:2419] E-value: 4.4e-41 Percent Identity: 34.5
Ensembl 110, assembly GRCh38.p14	ENSP00000399805 crystallin zeta [Source:HGNC Symbol;Acc:HGNC:2419] E-value: 4.4e-41 Percent Identity: 34.5

References