Pseudomonas fluorescens SBW25, PFLU5934 (hemC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SBW25
GCF_000009225.2|latest |
| Locus Tag |
PFLU5934
|
| Name |
hemC
|
| Replicon | chromosome |
| Genomic location | 6492274 - 6493215 (- strand) |
Cross-References
| RefSeq | YP_002875420.1 |
| GI | 229593301 |
| EC Number | 2.5.1.61 |
| Entrez | 7816442 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
porphobilinogen deaminase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.73 |
| Kyte-Doolittle Hydrophobicity Value | -0.046 |
| Molecular Weight (kDa) | 33.6 |
| Isoelectric Point (pI) | 5.44 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004841 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLU5934
Search term: hemC
Search term: porphobilinogen deaminase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value:
3.9e-63
Percent Identity:
43.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value:
3.9e-63
Percent Identity:
43.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value:
3.9e-63
Percent Identity:
43.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value:
3.9e-63
Percent Identity:
43.2
|
References
No references are associated with this feature.