Pseudomonas putida GB-1, PputGB1_0086

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0086
Name
Replicon chromosome
Genomic location 93103 - 93660 (+ strand)

Cross-References

RefSeq YP_001666338.1
GI 167031107
Entrez 5867774
INSDC ABY96002.1
NCBI Locus Tag PputGB1_0086
UniParc UPI0000F25915
UniProtKB Acc B0KF32
UniProtKB ID TSAC_PSEPG
UniRef100 UniRef100_B0KF32
UniRef50 UniRef50_Q88RQ9
UniRef90 UniRef90_Q88RQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
SUA5/yciO/yrdC domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.14
Kyte-Doolittle Hydrophobicity Value -0.166
Molecular Weight (kDa) 20519.3
Isoelectric Point (pI) 6.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 632 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000022 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0086

Human Homologs

Ensembl 110, assembly GRCh38.p14
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value: 2.3e-10
Percent Identity: 27.6

References

No references are associated with this feature.