Pseudomonas putida GB-1, PputGB1_0097 (trpA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_0097
|
| Name |
trpA
|
| Replicon | chromosome |
| Genomic location | 104350 - 105159 (- strand) |
Cross-References
| RefSeq | YP_001666349.1 |
| GI | 167031118 |
| EC Number | 4.2.1.20 |
| Entrez | 5867785 |
| NCBI Locus Tag | PputGB1_0097 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tryptophan synthase subunit alpha
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.07 |
| Kyte-Doolittle Hydrophobicity Value | 0.127 |
| Molecular Weight (kDa) | 28390.1 |
| Isoelectric Point (pI) | 4.98 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000035 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_0097
Search term: trpA
Search term: tryptophan synthase subunit alpha
|
Human Homologs
References
No references are associated with this feature.