Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
Locus Tag |
PputGB1_0500
|
Name |
rplR
|
Replicon | chromosome |
Genomic location | 576134 - 576484 (+ strand) |
RefSeq | YP_001666747.1 |
GI | 167031516 |
Entrez | 5868246 |
INSDC | ABY96411.1 |
NCBI Locus Tag | PputGB1_0500 |
UniParc | UPI000000EB43 |
UniProtKB Acc | B0KK83 |
UniProtKB ID | RL18_PSEPG |
UniRef100 | UniRef100_A5VXR3 |
UniRef50 | UniRef50_Q9RSL2 |
UniRef90 | UniRef90_Q4K549 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L18
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 10.68 |
Kyte-Doolittle Hydrophobicity Value | -0.253 |
Molecular Weight (kDa) | 12.6 |
Isoelectric Point (pI) | 10.88 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPB | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Pseudomonas aeruginosa | 2.82 | ELECTRON MICROSCOPY | 90.3 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 90.3 |
6SPD | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 90.3 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 90.3 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001463 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_0500
Search term: rplR
Search term: 50S ribosomal protein L18
|