Pseudomonas putida GB-1, PputGB1_0642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0642
Name
Replicon chromosome
Genomic location 729468 - 730961 (+ strand)

Cross-References

RefSeq YP_001666889.1
GI 167031658
Entrez 5868388
INSDC ABY96553.1
NCBI Locus Tag PputGB1_0642
UniParc UPI0000F244DB
UniProtKB Acc B0KM77
UniProtKB ID B0KM77_PSEPG
UniRef100 UniRef100_B0KM77
UniRef50 UniRef50_W1IVN1
UniRef90 UniRef90_Q1IFD7

Product

Feature Type CDS
Coding Frame 1
Product Name
methylmalonate-semialdehyde dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.09
Kyte-Doolittle Hydrophobicity Value -0.002
Molecular Weight (kDa) 53.4
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000128 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0642

Human Homologs

Ensembl 110, assembly GRCh38.p14
aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
E-value: 4.9e-124
Percent Identity: 44.7

References

No references are associated with this feature.