Pseudomonas putida GB-1, PputGB1_0926

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0926
Name
Replicon chromosome
Genomic location 1062205 - 1063584 (- strand)

Cross-References

RefSeq YP_001667172.1
GI 167031941
Entrez 5868686
INSDC ABY96836.1
NCBI Locus Tag PputGB1_0926
UniParc UPI000164C01B
UniProtKB Acc B0KQE8
UniProtKB ID B0KQE8_PSEPG
UniRef100 UniRef100_B0KQE8
UniRef50 UniRef50_A0A0B7D6X5
UniRef90 UniRef90_T2HDX6

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -0.37
Kyte-Doolittle Hydrophobicity Value -0.406
Molecular Weight (kDa) 50181.0
Isoelectric Point (pI) 6.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004088 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0926

Human Homologs

References

No references are associated with this feature.