Pseudomonas putida GB-1, PputGB1_1102

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1102
Name
Replicon chromosome
Genomic location 1252387 - 1253091 (+ strand)

Cross-References

RefSeq YP_001667346.1
GI 167032115
Entrez 5868861
INSDC ABY97010.1
NCBI Locus Tag PputGB1_1102
UniParc UPI0000F25209
UniProtKB Acc B0KRL6
UniProtKB ID B0KRL6_PSEPG
UniRef100 UniRef100_B0KRL6
UniRef50 UniRef50_Q886S5
UniRef90 UniRef90_Q88MS2

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.34
Kyte-Doolittle Hydrophobicity Value -0.185
Molecular Weight (kDa) 26063.6
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001978 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1102

Human Homologs

References

No references are associated with this feature.