Pseudomonas putida GB-1, PputGB1_1363 (rpsA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1363
Name
rpsA
Replicon chromosome
Genomic location 1524021 - 1525697 (+ strand)

Cross-References

RefSeq YP_001667606.1
GI 167032375
Entrez 5869127
INSDC ABY97270.1
NCBI Locus Tag PputGB1_1363
UniParc UPI00005FBD4E
UniProtKB Acc B0KTY1
UniProtKB ID B0KTY1_PSEPG
UniRef100 UniRef100_Q88M03
UniRef50 UniRef50_P0AG69
UniRef90 UniRef90_G8Q1R8

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S1
Synonyms
Evidence for Translation
Charge (pH 7) -30.09
Kyte-Doolittle Hydrophobicity Value -0.272
Molecular Weight (kDa) 61.6
Isoelectric Point (pI) 4.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002453 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1363
Search term: rpsA

Human Homologs

Ensembl 110, assembly GRCh38.p14
zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246]
E-value: 3.2e-07
Percent Identity: 38.0

References

No references are associated with this feature.