Pseudomonas putida GB-1, PputGB1_1438

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1438
Name
Replicon chromosome
Genomic location 1606010 - 1606861 (- strand)

Cross-References

RefSeq YP_001667681.1
GI 167032450
Entrez 5869203
INSDC ABY97345.1
NCBI Locus Tag PputGB1_1438
UniParc UPI0000F25ACA
UniProtKB Acc B0KUP0
UniProtKB ID B0KUP0_PSEPG
UniRef100 UniRef100_B0KUP0
UniRef50 UniRef50_A4VMX8
UniRef90 UniRef90_B1J4V6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.22
Kyte-Doolittle Hydrophobicity Value -0.002
Molecular Weight (kDa) 31515.1
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 503 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002722 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1438

Human Homologs

References

No references are associated with this feature.